#include <itkDeformationVectorFieldTransform.h>

Detailed Description

template<typename TScalarType = double, unsigned int NDimensions = 3>
class itk::DeformationVectorFieldTransform< TScalarType, NDimensions >

An itk transform based on a DeformationVectorField.

This class makes it easy to set a deformation vector field as a Transform-object.

The class inherits from the 0th-order AdvancedBSplineDeformableTransform, and converts a VectorImage to the B-spline CoefficientImage.

This is useful if you know for example how to deform each voxel in an image and want to apply it to that image.

Note: Better use the DeformationFieldInterpolatingTransform. It is more flexible, since it allows runtime specification of the spline order.

Definition at line 46 of file itkDeformationVectorFieldTransform.h.

Inheritance diagram for itk::DeformationVectorFieldTransform< TScalarType, NDimensions >:

Public Types
using	CoefficientImagePointer = typename Superclass::ImagePointer
using	CoefficientImageType = typename Superclass::ImageType
using	CoefficientPixelType = typename Superclass::PixelType
using	CoefficientVectorImagePointer = typename CoefficientVectorImageType::Pointer
using	CoefficientVectorImageType = Image<CoefficientVectorPixelType, Self::SpaceDimension>
using	CoefficientVectorPixelType = Vector<float, Self::SpaceDimension>
using	ConstPointer = SmartPointer<const Self>
using	Pointer = SmartPointer<Self>
using	Self = DeformationVectorFieldTransform
using	Superclass = AdvancedBSplineDeformableTransform<TScalarType, NDimensions, 0>
Public Types inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
using	ConstPointer
using	ContinuousIndexType
using	DerivativeWeightsFunctionPointer
using	DerivativeWeightsFunctionType
typedef typename ImageType::DirectionType	DirectionType
typedef IndexType	GridOffsetType
typedef typename ImageType::Pointer	ImagePointer
typedef Image< PixelType, Self::SpaceDimension >	ImageType
typedef typename RegionType::IndexType	IndexType
typedef typename ImageType::PointType	OriginType
typedef Array< unsigned long >	ParameterIndexArrayType
using	Pointer
typedef ImageRegion< Self::SpaceDimension >	RegionType
using	Self
typedef typename RegionType::SizeType	SizeType
using	SODerivativeWeightsFunctionPointer
using	SODerivativeWeightsFunctionType
typedef typename ImageType::SpacingType	SpacingType
using	Superclass
using	WeightFunctionBaseType
using	WeightsFunctionPointer
using	WeightsFunctionType
using	WeightsType
Public Types inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
using	ConstPointer
using	ContinuousIndexType
using	DirectionType
using	GridOffsetType
using	ImagePointer
using	ImageType
using	IndexType
typedef typename SpatialJacobianType::InternalMatrixType	InternalMatrixType
typedef std::vector< SpatialHessianType >	JacobianOfSpatialHessianType
typedef std::vector< SpatialJacobianType >	JacobianOfSpatialJacobianType
typedef OutputCovariantVectorType	MovingImageGradientType
typedef typename MovingImageGradientType::ValueType	MovingImageGradientValueType
typedef std::vector< uint64_t >	NonZeroJacobianIndicesType
using	OriginType
using	ParameterIndexArrayType
using	Pointer
using	RegionType
using	Self
using	SizeType
using	SpacingType
typedef FixedArray< Matrix< ScalarType, InputSpaceDimension, InputSpaceDimension >, OutputSpaceDimension >	SpatialHessianType
typedef Matrix< ScalarType, OutputSpaceDimension, InputSpaceDimension >	SpatialJacobianType
using	Superclass
Public Types inherited from itk::AdvancedTransform< double, NDimensions, NDimensions >
using	ConstPointer
using	InternalMatrixType
using	InverseTransformBaseType
using	JacobianOfSpatialHessianType
using	JacobianOfSpatialJacobianType
using	MovingImageGradientType
using	MovingImageGradientValueType
using	NonZeroJacobianIndicesType
using	Pointer
using	Self
using	SpatialHessianType
using	SpatialJacobianType
using	Superclass
using	TransformType
using	TransformTypeConstPointer
using	TransformTypePointer

Public Member Functions
virtual void	GetCoefficientVectorImage (CoefficientVectorImagePointer &vecImage) const
	ITK_DISALLOW_COPY_AND_MOVE (DeformationVectorFieldTransform)
	itkOverrideGetNameOfClassMacro (DeformationVectorFieldTransform)
	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)
	itkStaticConstMacro (SplineOrder, unsigned int, Superclass::SplineOrder)
virtual void	SetCoefficientVectorImage (const CoefficientVectorImageType *vecImage)
Public Member Functions inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
void	EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobian (const InputPointType &inputPoint, JacobianType &j, NonZeroJacobianIndicesType &nzji) const override
void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
unsigned int	GetNumberOfAffectedWeights () const override
NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const override
void	GetSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh) const override
void	GetSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj) const override
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedBSplineDeformableTransform)
	itkOverrideGetNameOfClassMacro (AdvancedBSplineDeformableTransform)
	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)
void	SetGridRegion (const RegionType &region) override
OutputPointType	TransformPoint (const InputPointType &point) const override
Public Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
const ImagePointer *	GetCoefficientImages () const
const FixedParametersType &	GetFixedParameters () const override
virtual DirectionType	GetGridDirection () const
virtual OriginType	GetGridOrigin () const
virtual RegionType	GetGridRegion () const
virtual SpacingType	GetGridSpacing () const
NumberOfParametersType	GetNumberOfParameters () const override
virtual NumberOfParametersType	GetNumberOfParametersPerDimension () const
const ParametersType &	GetParameters () const override
unsigned	GetSplineOrder () const
TransformCategoryEnum	GetTransformCategory () const override
bool	IsLinear () const override
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedBSplineDeformableTransformBase)
	itkOverrideGetNameOfClassMacro (AdvancedBSplineDeformableTransformBase)
	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)
void	SetCoefficientImages (ImagePointer images[])
void	SetFixedParameters (const FixedParametersType &parameters) override
virtual void	SetGridDirection (const DirectionType &direction)
virtual void	SetGridOrigin (const OriginType &origin)
virtual void	SetGridSpacing (const SpacingType &spacing)
void	SetIdentity ()
void	SetParameters (const ParametersType &parameters) override
void	SetParametersByValue (const ParametersType &parameters) override
OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const override
OutputVectorType	TransformVector (const InputVectorType &) const override
Public Member Functions inherited from itk::AdvancedTransform< double, NDimensions, NDimensions >
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override
virtual bool	GetHasNonZeroJacobianOfSpatialHessian () const
virtual bool	GetHasNonZeroSpatialHessian () const
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedTransform)
	itkOverrideGetNameOfClassMacro (AdvancedTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
static Pointer	Create (const unsigned splineOrder)

Protected Member Functions
	DeformationVectorFieldTransform ()
	~DeformationVectorFieldTransform () override
Protected Member Functions inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
	AdvancedBSplineDeformableTransform ()
void	ComputeNonZeroJacobianIndices (NonZeroJacobianIndicesType &nonZeroJacobianIndices, const RegionType &supportRegion) const override
void	PrintSelf (std::ostream &os, Indent indent) const override
void	WrapAsImages ()
	~AdvancedBSplineDeformableTransform () override=default
Protected Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
	AdvancedBSplineDeformableTransformBase ()=delete
virtual bool	InsideValidRegion (const ContinuousIndexType &index) const
void	PrintSelf (std::ostream &os, Indent indent) const override
ContinuousIndexType	TransformPointToContinuousGridIndex (const InputPointType &point) const
void	UpdateGridOffsetTable ()
void	UpdatePointIndexConversions ()
void	WrapAsImages ()
	~AdvancedBSplineDeformableTransformBase () override=default
Protected Member Functions inherited from itk::AdvancedTransform< double, NDimensions, NDimensions >
	AdvancedTransform ()=default
	~AdvancedTransform () override=default

Private Attributes
CoefficientImagePointer	m_Images [SpaceDimension] {}

Additional Inherited Members
Static Public Attributes inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
static constexpr unsigned	NumberOfWeights
Static Public Attributes inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
static constexpr unsigned int	NumberOfFixedParameters
Protected Types inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
typedef Image< JacobianPixelType, Self::SpaceDimension >	JacobianImageType
typedef typename JacobianType::ValueType	JacobianPixelType
Protected Types inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
using	JacobianImageType
using	JacobianPixelType
Protected Attributes inherited from itk::AdvancedBSplineDeformableTransform< double, 3, 0 >
DerivativeWeightsFunctionPointer	m_DerivativeWeightsFunctions [NDimensions]
const WeightsFunctionPointer	m_WeightsFunction
Protected Attributes inherited from itk::AdvancedBSplineDeformableTransformBase< double, NDimensions >
FixedArray< ImagePointer, NDimensions >	m_CoefficientImages
DirectionType	m_GridDirection
GridOffsetType	m_GridOffsetTable
OriginType	m_GridOrigin
RegionType	m_GridRegion
SpacingType	m_GridSpacing
DirectionType	m_IndexToPoint
const ParametersType *	m_InputParametersPointer
ParametersType	m_InternalParametersBuffer
DirectionType	m_PointToIndexMatrix
SpatialJacobianType	m_PointToIndexMatrix2
FixedArray< ScalarType, NDimensions >	m_PointToIndexMatrixDiagonal
FixedArray< ScalarType, NDimensions *NDimensions >	m_PointToIndexMatrixDiagonalProducts
bool	m_PointToIndexMatrixIsDiagonal
DirectionType	m_PointToIndexMatrixTransposed
SpatialJacobianType	m_PointToIndexMatrixTransposed2
ContinuousIndexType	m_ValidRegionBegin
ContinuousIndexType	m_ValidRegionEnd
FixedArray< ImagePointer, NDimensions >	m_WrappedImage
Protected Attributes inherited from itk::AdvancedTransform< double, NDimensions, NDimensions >
bool	m_HasNonZeroJacobianOfSpatialHessian
bool	m_HasNonZeroSpatialHessian